it's me
contact: email email
twitter: email
postal address: Laboratoire d'Informatique Gaspard-Monge
Cité Descartes, Bât Copernic -- 5, bd Descartes
Champs sur Marne 77454 Marne-la-Vallée Cedex 2
office: 4B106, Copernic bld. [google map][campus map][directions]
phone (office): (+33) 1 6095 7560

I am a CNRS Directeur de recherche. I am part of the Laboratoire d'Informatique Gaspard-Monge at the newly created Gustave Eiffel University (until 2019, University Paris-Est Marne-la-Vallée), where I belong to the MoA (Models and Algorithms) group.

My general field is Theoretical Computer Science, but my research subjects evolved over time. During last years, I have been doing research in the area of discrete algorithms: combinatorial algorithms, algorithmic complexity, algorithm design and engineering. I am also particularly interested in bioinformatics, especially in algorithmic methods of biosequence analysis. Please consult my research page for more information.

I participated in the development of mreps, YASS and StoRM software for DNA sequence analysis, as well as path software and ReBLOSUM scoring for protein sequence comparison. I also participated in the development of the Norine database. More recently, I have been involved in the design of RNFtools: a naming format for simulated NGS reads and associated toolbox.

If you are interested in metagenomics, check out our ProPhyle tool for metagenomic classification of whole genome sequencing data

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