import viz
import sys

if len(sys.argv) != 3:
    print >>sys.stderr, 'usage: python '+sys.argv[0]+' <align filename> <outdir>'
    print >>sys.stderr,'<align filename> is the name of the file generated by your aligner'
    print >>sys.stderr,'<outdir> is the path of the directory where the dot files will be generated'
    sys.exit(1)

viz.printAlignedFiles(sys.argv[1],sys.argv[2])